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2013 IEEE High Performance Extreme Computing Conference (HPEC ‘13) Seventeenth Annual HPEC Conference 10 - 12 September 2013 Westin Hotel, Waltham, MA USA
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Tuesday, September 10 OMG VSIPL (1pm-5pm)[Emerson] Organizers: Stefan Seefield & Tony Skjellum Tutorial: Analyzing Big Data with Matlab and D4M  (1pm-5pm)[Cambridge] Instructors: Jeremy Kepner, Chansup Byun, Julie Mullen, MIT Lincoln Laboratory Tutorial: Programming an FPGA using OpenCL (9am-noon)[Garfield] Instructor: Deshanand Singh, Director of High-Level Design at Altera Tutorial: Using OpenMP to accelerate an ARM system using DSP cores (1pm-5pm)[Garfield] Instructor: Ian Linault, Managing Director of nCore Wednesday, September 11 Morning Extreme Computing Plenary Session (9:00-10:45)[Eden Vale B] Chair: Bob Bond / MIT Lincoln Laboratory (9:00) Keynote: Title: Intel Xeon Phi (9:15) Dr. Pradeep Dubey, Intel Fellow & IEEE Fellow Invited Speakers: Open-System, Adiabatic Quantum Annealing (9:45) Dr. Robert Lucas, Director Computational Sciences USC ISI Performance/Power Envelope (10:15) Mr. Sanjive Argawala, Texas Instruments Fellow & Director of Silicon Development Break (10:45-11:00) Clouds & Grids (11:00-12:30)[Eden Vale A1] Chair: Patrick Dreher / DRC Invited Talk: Simulation as a Service Ashok Krishnamurthy, RENCI LLSuperCloud: Sharing HPC Systems for Diverse Rapid Prototyping Albert Reuther, Jeremy Kepner, William Arcand, David Bestor, Bill Bergeron, Chansup Byun, Matthew Hubbell, Peter Michaleas, Julie Mullen, Andrew Prout, Antonio Rosa, MIT Lincoln Laboratory Paper || Presentation An Improved Eigensolver for Quantum-dot Cellular Automata Simulations A. Taylor Baldwin, Jeffrey Will, Douglas Tougaw Valparaiso University Paper || Presentaion GPU (11:00-12:30)[Eden Vale A2] Chair: James Lebak / Mathworks PAKCK: Performance and Power Analysis of Key Computational Kernels on CPUs and GPUs Julia S. Mullen, Michael M. Wolf, Anna Klein MIT Lincoln Laboratory Paper || Presentation CrowdCL: Web-Based Volunteer Computing with WebCL Tommy MacWilliam, Cris Cecka Harvard Paper || Presentation GPU-Based Space-Time Adaptive Processing (STAP) for Radar Thomas M. Benson and Ryan Hersey, GTRI Edwin Culpepper, AFRL Paper || Presentation Secure Embedded Systems (11:00-12:30)[Eden Vale C1] Chair: Praveen Sharma / MIT Lincoln Laboratory Invited Talk: Modeling Attack Resistant PUF Design Based on Non-linear Current Mirrors Raghavan Kumar, Wayne Burleson University of Massachusetts Invited Talk: A Security Analysis of Amazon’s Elastic Compute Cloud Service Engin Kirda, Northeastern University FPGA (11:00-12:30)[Eden Vale C2] Chair: David Cousins / BBN Real-Time Traffic Sign Detection Using SURF Features on FPGA Jin Zhao, Sichao Zhu, Xinming Huang Worcester Polytechnic Institute Paper || Presentation Vendor Agnostic, High Performance, Double Precision Floating Point Division for FPGAs Xin Fang, Miriam Leeser Northeastern University Paper || Presentation FPGA-based Hyperspectral Covariance Coprocessor for Size, Weight, and Power Constrained Platforms David A. Kusinsky, MIT Lincoln Laboratory Miriam Leeser, Northeastern University Paper || Presentation Lunch; View Posters and Demos (12:30-1:30)[Emerson] Wednesday, September 11 Afternoon Clouds & Grids (1:30-3:00)[Eden Vale A1] Chair: Patrick Dreher / DRC A Mechanism to Improve the Performance of Hybrid MPI-OpenMP Applications in Grid Shikha Mehrotra, Shamjith KV, Prachi Pandey, Asvija B, R Sridharan Centre for Development of Advanced Computing, Government of India Paper || Presentation Expanding the High Performance Embedded ComputingTool Chest - Mixing C and Java Nazario Irizarry, Jr., MITRE Paper || Presentation GPU (1:30-3:00)[Eden Vale A2] Chair: James Lebak / Mathworks Re-Introduction of Communication-Avoiding FMM-Accelerated FFTs with GPU Acceleration M. Harper Langston, Muthu Baskaran, Benoˆıt Meister, Nicolas Vasilache, Richard Lethin Reservoir Labs Paper || Presentation Accelerating a Novel Particle-based Fluid Simulation on the GPU Zhilu Chen, James Kingsley, Xinming Huang, Erkan Tüzel Worcester Polytechnic Institute Paper || Presentation GPU Accelerated Elevation Map based Registration of Aerial Images Joseph French, William Turri, Joseph Fernando, Eric Balster University of Dayton Paper || Presentation Graphs & Sparse Matrices (1:30-3:00)[Eden Vale C1] Chair: Jeremy Kepner / MIT Lincoln Laboratory A Nested Dissection Partitioning Method for Parallel Sparse Matrix-Vector Multiplication Erik G. Boman, Sandia Michael M. Wolf, MIT Lincoln Laboratory Paper || Presentation Novel Algebras for Advanced Analytics in Julia Viral Shah, JuliaLang.org Alan Edelman, Stefan Karpinski, Jeff Bezanson, Jeremy Kepner MIT CSAIL Paper || Presentation Standards for Graph Algorithm Primitives Tim Mattson (Intel), David Bader (Ga Tech), Jon Berry (Sandia), Aydin Buluc (LBNL), Jack Dongarra (University of Tennessee), Christos Faloutsos (CMU), John Feo (PNNL), John Gilbert (UC Santa Barbara), Joseph Gonzalez (UC Berkeley), Bruce Hendrickson (Sandia), Jeremy Kepner (MIT), Charles Leiserson (MIT), Andrew Lumsdaine (Indiana University), David Padua (University of Illinois), Stephen Poole (ORNL), Steve Reinhardt (Cray), Mike Stonebraker (MIT), Steve Wallach (Convey), Andrew Yoo (LLNL) Paper || Presentation FPGA (1:30-3:00)[Eden Vale C2] Chair: David Cousins / BBN High Performance Embedded Computing Module Enabled by GPU, CPU and FPGA SOCs Jason Fritz, Joshua Pearson, Michael Bonato Colorado Engineering Paper || Presentaion Block Processor: A Resource-distributed Architecture Zeke Wang, Zhejiang University Paper || Presentation Dynamically Configurable Online Statistical Flow Feature Extractor on FPGA Da Tong, Viktor Prasanna University of Southern California Paper || Presentation Break (3:00-3:30) Panel: SHPEC - Secure High Performance Extreme Computing (3:30-5:00)[Eden Vale B] Chair: Craig Lund / Local Knowledge Panelists: Michael Vai, Richard Linderman Reception; View Posters and Demos; Attend BoFs (5:00-8:00) OMG VSIPL - Current and Upcoming Solutions for Performance, Portable Signal and Image Processing (6:00-7:00) [Eden Vale C3] Chair: Tony Skjellum / Run Time Computing Solutions Energy Efficient HPC BoF (6:00-7:00) [Eden Vale A1] Chair: Kurt Keville / MIT Graph Primitives (6:00-7:00) [Eden Vale C1] Chair: Timothy Mattson / Intel Posters/Demos September 11 and 12 All Day [Emerson and Lower Foyer] Vendor Demos [Lower Foyer]: GE Intelligent Platforms - Signal and Image Processing Demonstrations Peter Thompson, Senior Business Development Manager BrownDwarf ARM+DSP Supercomputer Demo nCore HPC Ian Lintault Efficient Gbit/s Data Transceivers Designed for Verification and SoC Integration Analog Circuit Works, Inc. Dr. Bill Ellersick Paper || Presentation OpenCL Programming for FPGA Applications BittWare Kristen Zaffini, MarCom Manager KeyDSP: Products Leveraging multicore ARM/DSP technology to Deliver Power Efficiency and Accelerated Performance to Signal Processing Applications CSP Inc. Ann Desrochers VSI/Pro®  RunTime Computing Solutions Jennifer Skjellum Using SciDB, A New Array Database for Scalable, In-database Complex Analytics Paradigm4 Marilyn Matz Posters [Emerson] GPU Accelerated Blood Flow Computation using the Lattice Boltzmann Method Cosmin Niţă, Lucian Mihai Itu Transilvania University Constantin Suciu, Siemens Paper || Presentation Enhancing a Cross-Platform Hyperspectral Image Analysis Library for Heterogeneous CUDA Support Brian A. Landron-Rivera, Jonathan Torres-Conty, Nayda G. Santiago University of Puerto Rico Paper || Presentation Acceleration of Particle Physics using FPGA-based Vector Processors with Narrow Custom Vector ALU Operations Aaron Severance, Joe Edwards, and Guy G.F. Lemieux VectorBlox Efficient Parallel Runtime Bounds Checking with the TAU Performance System John C. Linford, Sameer Shende, Allen D. Malony ParaTools Andrew Wissink, NASA Ames Paper || Presentation Parallel CPU and GPU Computations to Solve the Job Shop Scheduling Problem with Blocking Abdelhakim AitZai, Adel Dabah, Mourad Boudhar University of Science and Technology - Houari Boumediene Paper || Presentation Accelerating Monte Carlo Molecular Simulations Using Novel Extrapolation Schemes Combined with Fast Database Generation on Massively Parallel Machines Sahar Amir, Ahmad Kadoura, Amgad Salama, Shuyu Sun King Abdullah University of Science and Technology Paper || Presentation Big Data Analysis using Distributed Actors Framework Sanjeev Mohindra, Daniel Hook, Andrew Prout, Ai-Hoa Sanh, An Tran, Charles Yee MIT Lincoln Laboratory Paper || Presentation Tuning HPEC Linux Clusters for Real-time Determinism David Tetley, Joe Rolfe GE Intelligent Platforms Thursday September 12 Morning Extreme Data Plenary Session (9:00-10:45) [Eden Vale B] Chair: Dr. Albert Reuther / MIT Lincoln Laboratory (9:00) Keynote: Big Data (9:15) Prof. Michael Stonebraker, MIT CSAIL & ACM Fellow Invited Speakers: Computing Architectures for ISR: Emerging Trends (9:45) Mr. Robert Bond / Assistant Division Head MIT Lincoln Laboratory Securing Embedded Systems (10:15) Dr. Richard Linderman, Chief Scientist Information Directorate, AFRL & IEEE Fellow Break (10:45-11:00) Big Data (11:00-12:30) [Eden Vale A1] Chair: Sharon Sacco D4M 2.0 Schema: A General Purpose High Performance Schema for the Accumulo Database Jeremy Kepner, Christian Anderson, William Arcand, David Bestor, Bill Bergeron, Chansup Byun, Matthew Hubbell, Peter Michaleas, Julie Mullen, David O’Gwynn, Andrew Prout, Albert Reuther, Antonio Rosa, Charles Yee MIT Lincoln Laboratory Paper || Presentation Understanding Query Performance in Accumulo Scott M. Sawyer, B. David O’Gwynn, An Tran, Tamara Yu MIT Lincoln Laboratory Paper || Presentation Big Snapshot Stitching with Scarce Overlap Alexandros-Stavros Iliopoulos, Jun Hu, Nikos Pitsianis, Xiaobai Sun, David Brady Duke University Michael Gehm, University of Arizona Paper || Presentation Sensor Processing (11:00-12:30) [Eden Vale A2] Chair: Sanjeev Mohindra / MIT Lincoln Laboratory Biquad Implementation of an IIR Filter for IQ Mismatch Correction in an SoC RF Receiver Karen Gettings, Michael N. Ericson, Andrew K. Bolstad, Xiao Wang MIT Lincoln Laboratory Paper || Presentation Miniature Radar for Mobile Devices Praveen Sharma, Raoul Ouedraogo, Bradley Perry, David Aubin, Todd Levy, Daniel Souza, Jonathan Kitchens, John Peabody MIT Lincoln Laboratory Paper || Presentation 3D FFT for FPGAs Ben Humphries, Martin C. Herbordt Boston University Paper || Presentation Secure Embedded Systems (11:00-12:30) [Eden Vale C1] Chair: Praveen Sharam / MIT Lincoln Laboratory Invited Talk: Software-Defined IDS for Securing Embedded Mobile Devices Richard Skowyra, Sanaz Bahargam, Azer Bestavros Boston University Paper || Presentation Invited Talk: Quantifying Side Channel Leakage with Novel Algorithmic Confusion Analysis Yunsi Fei, A. Adam Ding, Jian Lao Northeastern University FPGA (11:00-12:30) [Eden Vale C2] Chair: David Cousins / BBN High-performance Dynamic Programming on FPGAs with OpenCL Sean Settle, Altera Paper || Presentation High Throughput Energy Efficient Multi-FFT Architecture on FPGAs Ren Chen, University of Southern California Neungsoo Park, Konkuk University Viktor Prasanna, University of Southern California Paper || Presentation Evaluating Energy Efficiency of Floating Point Matrix Multiplication on FPGAs Kiran Kumar Matamm, Hoang Le, Viktor Prasanna University of Southern California Paper || Presentation Lunch; View Posters and Demos (12:30-1:30)[Emerson] Thursday September 12 Afternoon Big Data (1:30-3:00) [Eden Vale A1] Chair: Sharon Sacco Image Search System Peter Cho, Michael Yee MIT Lincoln Laboratory Paper || Presentation Optimizing Performance of HPC Storage Systems Torben Kling Petersen, John Fragalla Xyratex Paper || Presentation A Clustered Manycore Processor Architecture for Embedded and Accelerated Applications Benoit Dupont de Dinechin, Renaud Ayrignac, Pierre-Edouard Beaucamps, Patrice Couvert, Francois Jacquet, Samuel Jones, Nicolas Morey Chaisemartin, Frederic Riss, Thierry Strudel Kalray SA Paper || Presentation Rising Stars - Sponsored by Mitre Corporation (1:30-3:00)[Eden Vale A2] Chair: Brian Sroka / The MITRE Corporation Robust Graph Traversal: Resiliency Techniques for Data Intensive Supercomputing Saurabh Hukerikar, Pedro Diniz, Robert Lucas University of Southern California - Information Sciences Institute Paper || Presentation Task Scheduling for Reconfigurable Systems in Dynamic Fault-Rate Environments Adam Jacobs, Nicholas Wulf, Alan D. George University of Florida Paper || Presentation Adaptive Routing in Hexagonal Torus Interconnection Networks Arash Shamaei, Bella Bose, Mary Flahive Oregon State University Paper || Presentation Secure Embedded Systems (1:30-3:00)[Eden Vale C1] Chair: David Kaeli / Northeastern University Invited Talk: Integrity Verification for Path Oblivious-RAM Ling Ren, Christopher Fletcher, Xiangyao Yu, Marten van Dijk, Srinivas Devadas MIT CSAIL Paper || Presentation A Novel Fast Modular Multiplier Architecture for 8,192-bit RSA Cryposystem Wei Wang, Xinming Huang Worcester Polytechnic Institute Paper || Presentation Efficient Gbit/s Data Transceivers Designed for Verification and SoC Integration William Ellersick, Analog Circuit Works Break (3:00-3:30) Best Paper Awards (3:30-5:30)[Eden Vale B]] Chair: Dr. Jeremy Kepner / MIT Lincoln Laboratory Exploiting Free Silicon for Energy-Efficient Computing Directly in NAND Flash-based Solid-State Storage Systems Peng Li, University of Minnesota, Kevin Gomez, Seagate Technology, David J. Lilja, University of Minnesota Paper || Presentation Accelerating Sparse Matrix-Matrix Multiplication with 3D-Stacked Logic-in-Memory Hardware - Winner of the Best Paper Award Qiuling Zhu, Tobias Graf, H. Ekin Sumbul, Larry Pileggi, Franz Franchetti Carnegie Mellon University Paper || Presentation Instruction Set Extensions for Photonic Synchronous Coalesced Accesses Paul Keltcher, David Whelihan, Jeffrey Hughes MIT Lincoln Laboratory Paper || Presentation SIMD Acceleration of Modular Arithmetic on Contemporary Embedded Platforms Krishna Chaitanya Pabbuleti, Deepak Hanamant Mane, Avinash Desai, Curt Albert, Patrick Schaumont Virginia Polytechnic and State University Paper || Presentation
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